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K Syed Ibrahim

India
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I can answer questions on Sequence analysis, Study materials. I cannot answer questions on Careers.

Sridhar Acharya Malkaram

U.S.
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Sequence and Structural Analysis, Next generation sequencing, Illumina, SOLiD, CHiP-sequencing, RNA sequencing, miRNA sequencing analysis, Molecular Dynamics, Protein and Nucleic acid simulations, computational methods, Bioinformatics tools, Biological Databases, Search techniques, Protein comparative modelling, Mutation analysis

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2017-03-15 Next Generation Seq:

Sharah,      1. GATK (Genome Analysis Tool Kit) provides a good guidelines for filtering variants. For sufficiently large dataset you can use the VQSR  for filtering ( http://gatkforums.broadinstitute.org/gatk/discussion/39/variant-quality-score-re)

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